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anapuce (version 2.3)

Tools for Microarray Data Analysis

Description

Functions for normalisation, differentially analysis of microarray data and local False Discovery Rate.

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Version

Install

install.packages('anapuce')

Monthly Downloads

38

Version

2.3

License

GPL-2

Maintainer

J Aubert

Last Published

February 5th, 2019

Functions in anapuce (2.3)

rowVars

Form row variances
spleen

Spleen Data set
apo

Apo AI data
filterByDefault

Filter applied on data before normalisation
fonctionMobile

fonctionMobile
lissageMM

Mean Average Smoothing
mixgamma

Gamma mixture
Intensity.Norm

Function to compute normalized intensity for each channel
MeanBySpot

Mean By Spot
est.varmixt

Variance Mixture Estimation
LocalFDR

Local FDR
LBI

Label Bias Index
fdr.estimate.eta0

Estimate the Proportion of Null p-Values
DiffAnalysis

Differential Analysis for paired data
FileChoice

Function to choose the files to analyze
DiffAnalysis.unpaired

Differential Analysis for unpaired data
normalisation

Function to normalize microarray data