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animint - DEPRECATED since July 2019

Please use animint2 instead.

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Version

Version

2017.01.04

License

GPL-3

Maintainer

Toby Dylan Hocking

Last Published

July 24th, 2019

Functions in animint (2017.01.04)

animint-package

Interactive animations

Compile and render an animint in a local directory

Climate data in central America from 1995 to 2000

ChromHMMiterations

ChromHMM iterations

Convert a list of ggplots to an interactive animation and post files as a gist

Graphical model structure change

The breakpointError of simulated signals

Shiny ui output function

generation.loci

Evolution simulation

ggplot2 geom with xmin and xmax aesthetics that covers the entire y range, useful for clickSelects background elements.

Function to get legend information from ggplot

Function to get legend information for each scale

FunctionalPruning

Functional Pruning Algorithm

Save the common columns for each tsv to one chunk

ggplot2 geom with ymin and ymax aesthetics that covers the entire x range, useful for clickSelects background elements.

Testing rank and compare SVM on simulated patterns

Interval regression

Make documentation web site.

Make a clickSelects geom_widerect that completely tiles the y range. This makes it easy to construct widerects for the common case of selecting a particular y value.

Class prior change

Lasso model of the prostate cancer data set

Demographics by country from 1960 to 2012

Initiate external processes necessary for running tests.

Kill child process(es) that may have been initiated in animint testing

World population by subcontinent

Parse selectors from aes names.

scale_size_animint

Scale point sizes using circle area, but specifying the radius in pixels.

Tornadoes in the United States from 1950 to 2012

Error rates of supervised learning methods for variant calling

Extract subset for each data.frame in a list of data.frame

Vervet monkey intestinal microbiome

Convert a ggplot to a list.

K-Nearest-Neighbors model of the mixture example data

Split data set into chunks and save them to separate files.

Save a layer to disk, save and return meta-data.

transform_shape

Function to transform R shapes into d3 shapes...

Convert R colors to RGB hexadecimal color values

Malaria parasite genome variants

Merge a list of data frames.

Split data.frame into recursive list of data.frame.

Test ROC curves

make_tallrect_or_widerect

Make a clickSelects geom_widerect or geom_tallrect that completely tiles the x or y range. This function is used internally by make_tallrect or make_widerect, which are more user-friendly.

Convenience function for an interactive bar that might otherwise be created using stat_summary(geom="bar").

Worldwide pirate attacks from 1978 to 2013

knit_print.animint

Insert an interactive animation into an R markdown document using a customized print method.

Check if character is an RGB hexadecimal color value

PeakConsistency

Consistency of segmentation models in simulated Poisson peaks

Make a clickSelects geom_tallrect that completely tiles the x range. This makes it easy to construct tallrects for the common case of selecting a particular x value.

Convenvience function for a showSelected plot label.

Run animint tests

Create an animint output element

theme for passing animint specific params

Spawn a child R session that runs a 'blocking' command