aafGenBank-class

getURL,aafGenBank-method


  An abstraction for GenBank accession numbers from Bioconductor data packages.


classes

Functions for handling data from Bioconductor Affymetrix
annotation data packages. Produces compact HTML and text
reports including experimental data and URL links to many
online databases. Allows searching biological metadata using
various criteria.

Colin A Smith

annaffy

Annotation tools for Affymetrix biological metadata

aafGenBank-class function

Objects are generally created by the <code><a rd-options="" href="/link/aafGenBank?package=annaffy&version=1.44.0" data-mini-rdoc="annaffy::aafGenBank">aafGenBank</a></code>
constructor.  Objects can also be created manually by calls of the
form <code>new("aafGenBank", accnum)</code>.

Objects from the Class

<dl>
    <dt><code>.Data</code>:</dt><dd>Object of class <code>character</code></dd> </dl> 

Slots

Class <code>character</code>, from data part.

Extends

<dl>
    <dt>getURL</dt><dd>
      (aafGenBank): Returns a URL to the corresponding entry in NCBI's
      GenBank database.
    </dd> </dl> See generic implementations of <code><a rd-options="" href="/link/getText?package=annaffy&version=1.44.0" data-mini-rdoc="annaffy::getText">getText</a></code>,
  <code><a rd-options="" href="/link/getHTML?package=annaffy&version=1.44.0" data-mini-rdoc="annaffy::getHTML">getHTML</a></code>, and <code><a rd-options="" href="/link/getTD?package=annaffy&version=1.44.0" data-mini-rdoc="annaffy::getTD">getTD</a></code>.

Methods

An abstraction for GenBank accession numbers from Bioconductor data packages.

aafGenBank-class: Class aafGenBank, a class for GenBank accession numbers

Description

Arguments

Objects from the Class

Slots

Extends

Methods

See Also