annovarR (version 1.0.0)

sqlite2sql: Function to dump sqlite database (Now only use system version sqlite)

Description

Function to dump sqlite database (Now only use system version sqlite)

Usage

sqlite2sql(sqlite_bin = c(Sys.which("sqlite"), Sys.which("sqlite3")),
  dbname = "", out.sql = "",
  cmd = "{sqlite_bin} {dbname} '.dump' | gzip > {out.sql}", debug = FALSE,
  ...)

Arguments

sqlite_bin

Sqlite executable file

dbname

Sqlite database path

out.sql

Output SQL (gzip format)

cmd

The command be used to dump

debug

If set TRUE, only print the command

...

Other parameters pass to system

Examples

# NOT RUN {
sqlite2sql('sqlite3', 'default.sqlite', debug = TRUE)
# }