anocva (version 0.1.1)

anocvaStats: Calculates ANOVA statistics for original data and bootstrap replicates.

Description

Calculates ANOVA statistics for original data and bootstrap replicates.

Usage

anocvaStats(idx, dataDist, id, k, N, r, clusteringFunction)

Arguments

idx

Identifies the bootstrap replicate. 1 means that original data should be used. 2 or more leads to resampling.

dataDist

A matrix with n subjects. Each subject has the size of NxN and represents the distances between the elements of the sample.

id

A list in range 1,2,...,n, where id[i] identifies the population id for i-th subject.

k

The number of populations.

N

Subjects size.

r

Optimal number of clusters.

clusteringFunction

determines the clustering function that you want to use. The default function is spectralClustering.

Value

ANOCVA deltaS and deltaSq statistics

References

Fujita A, Takahashi DY, Patriota AG, Sato JR (2014a) A non-parametric statistical test to compare clusters with applications in functional magnetic resonance imaging data. Statistics in Medicine 33: 4949<U+2013>4962

Caetano de Jesus DA. (2017) Evaluation of ANOCVA test for cluster comparison through simulations. Master Dissertation. Institute of Mathematics and Statistics, University of S<U+00E3>o Paulo.