simulate.Tau.X

Minimum size of unsampled splits (see appendix 1)

epsilon

alpha

beta

Boolean, should the abundances be computed as well? (default to FALSE)

Clade abundance-richness index (if ab)

x.ab

Optional, vector of lambda_epsilon returned by the function lambda_N. If set to NULL (the default) it will be computed inside the function

lambda

Simulates the time before the splitting of the marks into two different fragments, and the size of the fragment at this time.

Simulation and analysis
of phylogenetic tree topologies using statistical indices. It
is a companion library of the 'ape' package. It provides
additional functions for reading, plotting, manipulating
phylogenetic trees. It also offers convenient web-access to
public databases, and enables testing null models of
macroevolution using corrected test statistics. Trees of class
"phylo" (from 'ape' package) can be converted easily.
Implements methods described in Bortolussi et al. (2005)
<doi:10.1093/bioinformatics/bti798> and Maliet et al. (2017)
<doi:10.1101/224295>.

simulate.Tau.X: Simulate (Tau, X_Tau-)

Description

Usage

Arguments

References