yule_lengths

tmax

<p>Simulates node depths in the birth-death model, conditionned by the number of tips and the age of the root (using the expression in "The shape and probability of reconstructed phylogenies", by Amaury Lambert and Tanja Stadler (Theoretical Population Biology, 2013))</p>

Simulation and analysis
of phylogenetic tree topologies using statistical indices. It
is a companion library of the 'ape' package. It provides
additional functions for reading, plotting, manipulating
phylogenetic trees. It also offers convenient web-access to
public databases, and enables testing null models of
macroevolution using corrected test statistics.  Trees of class
"phylo" (from 'ape' package) can be converted easily.
Implements methods described in Bortolussi et al. (2005)
<doi:10.1093/bioinformatics/bti798> and Maliet et al. (2017)
<doi:10.1101/224295>.

Michael Blum

yule_lengths: Internal BetaAlphaEta function

Description

Usage

Arguments

References