vcv.phylo

a character giving the model used to compute the
    variances and covariances of the phynotype; by default
    <code>"Brownian"</code>. Currently only Brownian is available.

model

a logical indicating whether the correlation matrix should
    be returned (<code>TRUE</code>); by default the variance-covariance matrix
    is returned (<code>FALSE</code>).

This function computes the expected variances and covariances of a
  continuous phenotype assuming it evolves under a given model
  (currently only the model of Brownian motion is available).

multivariate

manip

Ape provides functions for reading, and plotting phylogenetic
  trees in parenthetic format (standard Newick format), analyses of
  comparative data in a phylogenetic framework, analyses of diversification
  and macroevolution, computing distances from allelic and nucleotide data,
  reading nucleotide sequences from GenBank via internet, and several tools
  such  as Mantel's test, computation of minimum spanning tree, or the
  population parameter theta based on various approaches.

vcv.phylo: Phylogenetic Variance-covariance or Correlation Matrix

Description

Usage

Arguments

Value

References

See Also