plot.varcomp

xlab

ylab

plot type ("l", "p" or "b", see <code><a href="/link/plot?package=ape&version=2.2-4" rd-options="" data-mini-rdoc="ape::plot">plot</a></code>)

type

Further argument sent to the <code><a href="/link/xyplot?package=ape&version=2.2-4&to=lattice" rd-options="lattice" data-mini-rdoc="lattice::xyplot">xyplot</a></code> function.

Plot previously estimated variance components.

hplot

ape provides functions for reading, writing, plotting,
  and manipulating phylogenetic trees, analyses of comparative data
  in a phylogenetic framework, analyses of diversification and
  macroevolution, computing distances from allelic and nucleotide
  data, reading nucleotide sequences, and several tools such as
  Mantel's test, computation of minimum spanning tree, the population
  parameter theta based on various approaches, nucleotide diversity,
  generalized skyline plots, estimation of absolute evolutionary rates
  and clock-like trees using mean path lengths, non-parametric rate
  smoothing and penalized likelihood, classifying genes in trees using
  the Klastorin-Misawa-Tajima approach. Phylogeny estimation can be done
  with the NJ, BIONJ, and ME methods.

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plot.varcomp: Plot Variance Components

Description

Usage

Arguments

Value

See Also