ape (version 2.8)

correlogram.formula: Phylogenetic Correlogram

Description

This function computes a correlogram from taxonomic levels.

Usage

correlogram.formula(formula, data = NULL, use = "all.obs")

Arguments

Value

An object of class correlogram which is a data frame with three columns:obsthe computed Moran's Ip.valuesthe corresponding P-valueslabelsthe names of each levelor an object of class correlogramList containing a list of objects of class correlogram if several variables are given as response in formula.

Details

See the vignette in R: vignette("MoranI").

See Also

plot.correlogram, Moran.I

Examples

Run this code
data(carnivora)
### Using the formula interface:
co <- correlogram.formula(SW ~ Order/SuperFamily/Family/Genus,
      data=carnivora)
co
plot(co)
### Several correlograms on the same plot:
cos <- correlogram.formula(SW + FW ~ Order/SuperFamily/Family/Genus,
      data=carnivora)
cos
plot(cos)

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