SDM: Construction of Consensus Distance Matrix With SDM
Description
This function implements the SDM method of Criscuolo et al. (2006) for
a set of n distance matrices.Value
a 2-element list containing a distance matrix labelled by the union of
the set of taxa of the input distance matrices, and a variance matrix
associated to the returned distance matrix.Details
Reconstructs a consensus distance matrix from a set of input distance
matrices on overlapping sets of taxa. Potentially missing values in
the supermatrix are represented by NA
. An error is returned if
the input distance matrices can not resolve to a consensus matrix.References
Criscuolo, A., Berry, V., Douzery, E. J. P. , and Gascuel, O. (2006)
SDM: A fast distance-based approach for (super)tree building in
phylogenomics. Systematic Biology, 55, 740--755.