nodepath

0th

Percentile

Find Paths of Nodes

This function finds paths of nodes in a tree. The nodes can be internal and/or terminal (i.e., tips).

Keywords
manip
Usage
nodepath(phy, from = NULL, to = NULL)
Arguments
phy
an object of class "phylo".
from, to
integers giving node or tip numbers.
Details

By default, this function returns all the paths from the root to each tip of the tree. If both arguments from and to are specified, the shortest path of nodes linking them is returned.

Value

  • a list of vectors of integers (by default), or a single vector of integers.

See Also

getMRCA

Aliases
  • nodepath
Examples
tr <- rtree(2)
nodepath(tr)
nodepath(tr, 1, 2)
Documentation reproduced from package ape, version 3.2, License: GPL (>= 2)

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