which.edge

0th

Percentile

Identifies Edges of a Tree

This function identifies the edges that belong to a group (possibly non-monophyletic) specified as a set of tips.

Keywords
manip
Usage
which.edge(phy, group)
Arguments
phy

an object of class "phylo".

group

a vector of mode numeric or character specifying the tips for which the edges are to be identified.

Details

The group of tips specified in `group' may be non-monophyletic (paraphyletic or polyphyletic), in which case all edges from the tips to their most recent common ancestor are identified.

The identification is made with the indices of the rows of the matrix `edge' of the tree.

Value

a numeric vector.

See Also

bind.tree, drop.tip, root

Aliases
  • which.edge
Documentation reproduced from package ape, version 5.3, License: GPL (>= 2)

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