rm.gaps: Remove gap-only sequences for missing data
Description
In multidna and multiphyDat, some individuals may not be sequenced for all genes, resulting in gap-only sequences for missing data.
The generic function rm.gaps has method for both objects; it identifies the missing sequences, and removes gap-only sequences from the alignments wherever needed.
Usage
rm.gaps(x, ...)
"rm.gaps"(x, ...)
"rm.gaps"(x, ...)
Arguments
x
a multidna or multiphyDat object.
...
further arguments passed to other methods (currently not used).