apex (version 1.0.6)

multidna2multiphyDat: Conversions between multidna and multiphyDat

Description

The functions multidna2multiphyDat and multiphyDat2multidna are used to convert data between multidna and multiphyDat classes.

Usage

multidna2multiphyDat(x)
multiphyDat2multidna(x)

Arguments

x

a multidna or multiphyDat object.

Author

Thibaut Jombart , Zhian N. Kamvar, Klaus Schliep

See Also

• concatenate

• DNAbin2genind to convert single DNAbin objects.

Examples

## simple conversion with nicely ordered output
data(woodmouse)
genes <- list(gene1=woodmouse[,1:500], gene2=woodmouse[,501:965])
x <- new("multidna", genes)
x

## conversion multidna -> multiphyDat
y <- multidna2multiphyDat(x)
y

## check round trip
identical(x, multiphyDat2multidna(y))