Scores of the covariates X
ARMADA.summary(X, resultat.ARMADA.select)the matrix (or data.frame) of covariates, dimension n*p (n is the sample size, p the number of covariates). X must have colnames.
the output of the ARMADA.select function: a list with 8 vectors, called: genes_rf_thres, genes_rf_interp, genes_lasso, genes_bonferroni, genes_BH, genes_qvalues, genes_localfdr, genes_FAMT. The 8 vectors are the selected covariates by the corresponding selection methods.
gene_list: data.frame with p rows and 2 columns, the first column gives the names of the covariates, the second column is the scores of the covariates.
The function ARMADA.summary gives the scores of all the covariates. The score of a variable is an integer between 0 and 8, and represents the number of selections of this variable by the 8 selection methods.