Fields and Methods
Methods:
rll{
getFitFunction -
}
Methods inherited from CopyNumberSegmentationModel:
fit, getAsteriskTags, getFitFunction, getPositionChipTypeUnit, getRegions, getTags, migrateTool, plot, plotCopyNumberRegionLayers, writeRegions
Methods inherited from CopyNumberChromosomalModel:
as.character, calculateChromosomeStatistics, clearCache, estimateSds, extractRawCopyNumbers, fit, getMatrixChipEffectFiles, getRawCnData, getReferenceSetTuple, getRefSetTuple, isPaired, newPlot, plotAxesLayers, plotChromosomesLayers, plotCytobandLayers, plotFitLayers, plotGridHorizontalLayers, plotRawCopyNumbers, plotSampleLayers
Methods inherited from ChromosomalModel:
as.character, clearCache, fit, getAlias, getArrays, getAsteriskTags, getChipEffectFiles, getChipType, getChipTypes, getChromosomes, getFullName, getFullNames, getGenome, getGenomeData, getGenomeFile, getListOfAromaUgpFiles, getListOfChipEffectSets, getListOfGenomeInformations, getName, getNames, getParentPath, getPath, getPcuTheta, getPositionChipTypeUnit, getReportPath, getRootPath, getSetTuple, getTableOfArrays, getTags, nbrOfArrays, nbrOfChipTypes, setAlias, setGenome
Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save