aroma.affymetrix (version 1.6.0)

ChipEffectGroupMerge: The ChipEffectGroupMerge class

Description

Package: aroma.affymetrix Class ChipEffectGroupMerge Object ~~| ~~+--AromaTransform ~~~~~~~| ~~~~~~~+--Transform ~~~~~~~~~~~~| ~~~~~~~~~~~~+--ChipEffectTransform ~~~~~~~~~~~~~~~~~| ~~~~~~~~~~~~~~~~~+--ChipEffectGroupMerge Directly known subclasses: SnpChipEffectGroupMerge public static class ChipEffectGroupMerge extends ChipEffectTransform This class represents a method that merges chip effects across groups unit by unit.

Usage

ChipEffectGroupMerge(dataSet=NULL, fcn=NULL, ...)

Arguments

dataSet

A ChipEffectSet.

fcn

A function used to "merge" groups.

...

Additional arguments passed to the constructor of ChipEffectTransform.

Fields and Methods

Methods: rll{ getCdf - getMergeFunction - process Normalizes the data set. setMergeFunction - } Methods inherited from Transform: getOutputDataSet, getOutputDataSetOLD20090509, getOutputFiles Methods inherited from AromaTransform: getExpectedOutputFiles, getExpectedOutputFullnames, getFullName, getInputDataSet, getName, getOutputDataSet, getOutputDataSet0, getOutputFiles, getPath, getTags, isDone, process, setTags Methods inherited from Object: asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save