Object
~~|
~~+--Model
~~~~~~~|
~~~~~~~+--UnitModel
~~~~~~~~~~~~|
~~~~~~~~~~~~+--MultiArrayUnitModel
Directly known subclasses:
AffineCnPlm, AffinePlm, AffineSnpPlm, AvgCnPlm, AvgPlm, AvgSnpPlm, ExonRmaPlm, HetLogAddCnPlm, HetLogAddPlm, HetLogAddSnpPlm, MbeiCnPlm, MbeiPlm, MbeiSnpPlm, ProbeLevelModel, RmaCnPlm, RmaPlm, RmaSnpPlm
public abstract static class MultiArrayUnitModel
extends UnitModel
This abstract class represents a unit model that fits one model per unit
based on signals for all arrays in the data set.
The nature of a multi-array unit model is that all arrays must be
available at the time of the fit and the estimated parameters will
depend on the data from all arrays.
Thus, if the signals in one array changes the model has to be refitted.MultiArrayUnitModel(...)UnitModel.getListOfPriors -
setListOfPriors -
}
Methods inherited from UnitModel:
findUnitsTodo, getAsteriskTags, getFitSingleCellUnitFunction
Methods inherited from Model:
fit, getAlias, getAsteriskTags, getDataSet, getFullName, getName, getPath, getRootPath, getTags, setAlias, setTags
Methods inherited from Object:
asThis, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save