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aroma.affymetrix (version 2.11.1)

ChipEffectFile$fromDataFile: Retrive an existing CEL file, or create from CDF template if missing

Description

Retrive an existing CEL file, or create from CDF template if missing.

Usage

## Static method (use this):
## ChipEffectFile$fromDataFile(df=NULL, filename=sprintf("%s,chipEffects.CEL",
##   getFullName(df)), path, name=getName(df), cdf=NULL, ..., verbose=FALSE)
## Don't use the below:
## S3 method for class 'ChipEffectFile':
fromDataFile(static, df=NULL, filename=sprintf("\%s,chipEffects.CEL", getFullName(df)),
  path, name=getName(df), cdf=NULL, ..., verbose=FALSE)

Arguments

static
df
filename
The filename of the CEL file.
path
The path to the directory where to find/create the CEL file.
name
The name of the array to be stored in the CEL header.
cdf
The template AffymetrixCdfFile used for creating a CEL file from scratch.
...
Passed to createCel.
verbose
See Verbose.

Value

See Also

allocateFromCdf() of AffymetrixCelFile. For more information see ChipEffectFile.