byChipType.DChipSnpInformation

DChipSnpInformation.byChipType

byChipType,DChipSnpInformation-method

A <code><a rd-options="base" href="/link/character?package=aroma.affymetrix&version=3.0.0&to=base" data-mini-rdoc="base::character">character</a></code> string.

chipType

A <code><a rd-options="base" href="/link/character?package=aroma.affymetrix&version=3.0.0&to=base" data-mini-rdoc="base::character">character</a></code> string specifying the root path, i.e.
   the annotation directory.

rootPath

An optional <code><a rd-options="base" href="/link/character?package=aroma.affymetrix&version=3.0.0&to=base" data-mini-rdoc="base::character">character</a></code> string specifying the version
   string, if more than one version is available.

version

An optional filename pattern used to locate the
   dChip genome file.  If <code><a rd-options="base" href="/link/NULL?package=aroma.affymetrix&version=3.0.0&to=base" data-mini-rdoc="base::NULL">NULL</a></code>, a default pattern is used.

pattern

See <code><a rd-options="R.utils" href="/link/Verbose?package=aroma.affymetrix&version=3.0.0&to=R.utils" data-mini-rdoc="R.utils::Verbose">Verbose</a></code>.

verbose


 Defines a DChipSnpInformation object by chip type.


methods

internal

programming

A cross-platform R framework that facilitates processing of any number of Affymetrix microarray samples regardless of computer system.  The only parameter that limits the number of chips that can be processed is the amount of available disk space.  The Aroma Framework has successfully been used in studies to process tens of thousands of arrays.  This package has actively been used since 2006.

byChipType.DChipSnpInformation: Defines a DChipSnpInformation object by chip type

Description

Usage

Arguments

Value

See Also