convert.AffymetrixCdfFile

AffymetrixCdfFile.convert

convert,AffymetrixCdfFile-method

chipType

A suffix added to the chip type of the new CDF.

suffix

A string separating the chip type and the suffix string.

The path where to store the new CDF file.

path

Additional arguments passed to <code><a rd-options="affxparser" href="/link/convertCdf?package=aroma.affymetrix&version=3.0.0&to=affxparser" data-mini-rdoc="affxparser::convertCdf">convertCdf</a></code>.

A <code><a rd-options="base" href="/link/logical?package=aroma.affymetrix&version=3.0.0&to=base" data-mini-rdoc="base::logical">logical</a></code> or <code><a rd-options="R.utils" href="/link/Verbose?package=aroma.affymetrix&version=3.0.0&to=R.utils" data-mini-rdoc="R.utils::Verbose">Verbose</a></code>.

verbose


 Converts a CDF into the same CDF but with another format.


methods

internal

A cross-platform R framework that facilitates processing of any number of Affymetrix microarray samples regardless of computer system.  The only parameter that limits the number of chips that can be processed is the amount of available disk space.  The Aroma Framework has successfully been used in studies to process tens of thousands of arrays.  This package has actively been used since 2006.

convert.AffymetrixCdfFile: Converts a CDF into the same CDF but with another format

Description

Usage

Arguments

Value

See Also