getGenomeInformation.AffymetrixCdfFile

AffymetrixCdfFile.getGenomeInformation

getGenomeInformation,AffymetrixCdfFile-method

A <code><a rd-options="base" href="/link/character?package=aroma.affymetrix&version=3.0.0&to=base" data-mini-rdoc="base::character">character</a></code> <code><a rd-options="base" href="/link/vector?package=aroma.affymetrix&version=3.0.0&to=base" data-mini-rdoc="base::vector">vector</a></code> specifying what type of genome
    information sets to search for.

types

If <code><a rd-options="base:logical" href="/link/FALSE?package=aroma.affymetrix&version=3.0.0&to=base%3Alogical" data-mini-rdoc="base:logical::FALSE">FALSE</a></code>, cached information is retrieved, otherwise not.

force

A <code><a rd-options="base" href="/link/logical?package=aroma.affymetrix&version=3.0.0&to=base" data-mini-rdoc="base::logical">logical</a></code> or <code><a rd-options="R.utils" href="/link/Verbose?package=aroma.affymetrix&version=3.0.0&to=R.utils" data-mini-rdoc="R.utils::Verbose">Verbose</a></code>.

verbose


 Gets genome information for this chip type.


methods

internal

A cross-platform R framework that facilitates processing of any number of Affymetrix microarray samples regardless of computer system.  The only parameter that limits the number of chips that can be processed is the amount of available disk space.  The Aroma Framework has successfully been used in studies to process tens of thousands of arrays.  This package has actively been used since 2006.

getGenomeInformation.AffymetrixCdfFile: Gets genome information for this chip type

Description

Usage

Arguments

Value

See Also