process.DChipQuantileNormalization

DChipQuantileNormalization.process

process,DChipQuantileNormalization-method

Arguments passed to
      <code><a rd-options="aroma.light" href="/link/normalizeQuantileSpline.numeric?package=aroma.affymetrix&version=3.0.0&to=aroma.light" data-mini-rdoc="aroma.light::normalizeQuantileSpline.numeric">normalizeQuantileSpline.numeric</a></code>.

If <code><a rd-options="base:logical" href="/link/TRUE?package=aroma.affymetrix&version=3.0.0&to=base%3Alogical" data-mini-rdoc="base:logical::TRUE">TRUE</a></code>, data already normalized is re-normalized,
      otherwise not.

force

See <code><a rd-options="R.utils" href="/link/Verbose?package=aroma.affymetrix&version=3.0.0&to=R.utils" data-mini-rdoc="R.utils::Verbose">Verbose</a></code>.

verbose

methods

internal

A cross-platform R framework that facilitates processing of any number of Affymetrix microarray samples regardless of computer system.  The only parameter that limits the number of chips that can be processed is the amount of available disk space.  The Aroma Framework has successfully been used in studies to process tens of thousands of arrays.  This package has actively been used since 2006.

process.DChipQuantileNormalization: Normalizes the data set

Description

Usage

Arguments

Value

See Also