setCdf.AffymetrixCelSet

AffymetrixCelSet.setCdf

setCdf,AffymetrixCelSet-method

An <code><a rd-options="" href="/link/AffymetrixCdfFile?package=aroma.affymetrix&version=3.0.0" data-mini-rdoc="aroma.affymetrix::AffymetrixCdfFile">AffymetrixCdfFile</a></code> object.

If <code><a rd-options="base:logical" href="/link/TRUE?package=aroma.affymetrix&version=3.0.0&to=base%3Alogical" data-mini-rdoc="base:logical::TRUE">TRUE</a></code>, progress details are printed, otherwise not.
    May also be a <code><a rd-options="R.utils" href="/link/Verbose?package=aroma.affymetrix&version=3.0.0&to=R.utils" data-mini-rdoc="R.utils::Verbose">Verbose</a></code> object.

verbose

(Internal) If <code><a rd-options="base:logical" href="/link/FALSE?package=aroma.affymetrix&version=3.0.0&to=base%3Alogical" data-mini-rdoc="base:logical::FALSE">FALSE</a></code>, arguments are not validated.

.checkArgs


 Sets the CDF structure for this CEL set.  This structures is assigned to all CEL files in the set.


methods

internal

A cross-platform R framework that facilitates processing of any number of Affymetrix microarray samples regardless of computer system.  The only parameter that limits the number of chips that can be processed is the amount of available disk space.  The Aroma Framework has successfully been used in studies to process tens of thousands of arrays.  This package has actively been used since 2006.

setCdf.AffymetrixCelSet: Sets the CDF structure for this CEL set

Description

Usage

Arguments

Value

See Also