getFitAromaUgpFile.MultiSourceCopyNumberNormalization

MultiSourceCopyNumberNormalization.getFitAromaUgpFile

getFitAromaUgpFile,MultiSourceCopyNumberNormalization-method

Gets the UGP file specifying the common set of loci to normalize at.

methods

internal

Methods for analyzing DNA copy-number data.  Specifically,
this package implements the multi-source copy-number normalization (MSCN)
method for normalizing copy-number data obtained on various platforms and
technologies.  It also implements the TumorBoost method for normalizing
paired tumor-normal SNP data.

Henrik Bengtsson

aroma.cn

Copy-Number Analysis of Large Microarray Data Sets

Pierre Neuvial

getFitAromaUgpFile.MultiSourceCopyNumberNormalization function

Arguments

Author

Gets the UGP file specifying the common set of loci to normalize at — getFitAromaUgpFile.MultiSourceCopyNumberNormalization

getFitAromaUgpFile.MultiSourceCopyNumberNormalization: Gets the UGP file specifying the common set of loci to normalize at

Description

Usage

Value

Arguments

Author

See Also