findAnnotationData.default

findAnnotationData

A <code><a href="/link/character?package=aroma.core&version=1.1.2&to=base" rd-options="base" data-mini-rdoc="base::character">character</a></code> string.

name

Optional <code><a href="/link/character?package=aroma.core&version=1.1.2&to=base" rd-options="base" data-mini-rdoc="base::character">character</a></code> string.

pattern

If <code><a href="/link/FALSE?package=aroma.core&version=1.1.2&to=base%3Alogical" rd-options="base:logical" data-mini-rdoc="base:logical::FALSE">FALSE</a></code>, files and directories starting
     with a periods are ignored.

private

Arguments passed to <code><a href="/link/findFiles?package=aroma.core&version=1.1.2&to=affxparser" rd-options="affxparser" data-mini-rdoc="affxparser::findFiles">findFiles</a></code>.

If <code><a href="/link/TRUE?package=aroma.core&version=1.1.2&to=base%3Alogical" rd-options="base:logical" data-mini-rdoc="base:logical::TRUE">TRUE</a></code>, only the first matching pathname is returned.

firstOnly

A <code><a href="/link/character?package=aroma.core&version=1.1.2&to=base" rd-options="base" data-mini-rdoc="base::character">character</a></code> <code><a href="/link/vector?package=aroma.core&version=1.1.2&to=base" rd-options="base" data-mini-rdoc="base::vector">vector</a></code> of paths to search.
     If <code><a href="/link/NULL?package=aroma.core&version=1.1.2&to=base" rd-options="base" data-mini-rdoc="base::NULL">NULL</a></code>, default paths are used.

paths

A <code><a href="/link/character?package=aroma.core&version=1.1.2&to=base" rd-options="base" data-mini-rdoc="base::character">character</a></code> string specifying what type of annotation
     to search for.

A <code><a href="/link/logical?package=aroma.core&version=1.1.2&to=base" rd-options="base" data-mini-rdoc="base::logical">logical</a></code> or <code><a href="/link/Verbose?package=aroma.core&version=1.1.2&to=R.utils" rd-options="R.utils" data-mini-rdoc="R.utils::Verbose">Verbose</a></code>.

verbose

internal

This package is a private support package for
        aroma.affymetrix et al.  The methods and classes of this
        package are independent of platform.  It's API is in alpha and
        beta stage.

findAnnotationData: Locates an annotation data file

Description

Usage

Arguments

Value