aroma.core (version 1.1.2)

segmentByHaarSeg.RawGenomicSignals: Segment copy numbers using the HaarSeg method

Description

Segment copy numbers using the HaarSeg method of the HaarSeg package.

Usage

## S3 method for class 'RawGenomicSignals':
segmentByHaarSeg(this, ..., cache=FALSE, force=FALSE, verbose=FALSE)

Arguments

...

Additional arguments passed to the segmentation function.

verbose

See Verbose.

Value

• Returns the fit object.

Details

Internally *HaarSeg::haarSeg() is used to segment the signals. This segmentation method support weighted segmentation.

See Also

Internally the segmentation function *HaarSeg::haarSeg() is used. For more information see RawGenomicSignals.