SegmentedGenomicSignalsInterface

Package: aroma.core Class SegmentedGenomicSignalsInterface<code><a href="/link/Interface?package=aroma.core&version=2.9.0&to=R.oo" rd-options="R.oo" data-mini-rdoc="R.oo::Interface">Interface</a></code><code>~~|</code><code>~~+--</code><code>SegmentedGenomicSignalsInterface</code>Directly known subclasses:<a href="/link/SegmentedAlleleBFractions?package=aroma.core&version=2.9.0&to=aroma.core" rd-options="aroma.core" data-mini-rdoc="aroma.core::SegmentedAlleleBFractions">SegmentedAlleleBFractions</a>, <a href="/link/SegmentedCopyNumbers?package=aroma.core&version=2.9.0&to=aroma.core" rd-options="aroma.core" data-mini-rdoc="aroma.core::SegmentedCopyNumbers">SegmentedCopyNumbers</a>public class SegmentedGenomicSignalsInterfaceextends <a href="/link/Interface?package=aroma.core&version=2.9.0&to=R.oo" rd-options="R.oo" data-mini-rdoc="R.oo::Interface">Interface</a>

classes

This package contains core methods and classes used by
        higher-level aroma.* packages part of the Aroma Project, e.g.
        aroma.affymetrix and aroma.cn.  Its API should be considered to
        be in alpha and beta versions, and is mostly of interest to
        developers.

Henrik Bengtsson

aroma.core

Core methods and classes used by aroma.* packages part of The
        Aroma Framework

SegmentedGenomicSignalsInterface function

Methods:<tabular>rll</tabular>{
 	<code>as.data.frame</code> 	-	<code>binnedSmoothingByState</code> 	-	<code>extractSubsetByState</code> 	-	<code>getStateColorMap</code> 	-	<code>getStateColors</code> 	-	<code>getStates</code> 	-	<code>getUniqueStates</code> 	-	<code>kernelSmoothingByState</code> 	-	<code>plot</code> 	-	<code>points</code> 	-	<code>setStateColorMap</code> 	-	<code>setStates</code> 	-}
 Methods inherited from Interface:extend, print, uses

SegmentedGenomicSignalsInterface: The SegmentedGenomicSignalsInterface class interface

Description

Usage

Arguments

Fields and Methods