AromaRepository

Package: aroma.core 
Class AromaRepository 
<code>Object</code> 
<code>~~|</code> 
<code>~~+--</code><code>AromaRepository</code> 
Directly known subclasses: 
 
public static class AromaRepository 
extends Object 
An AromaRepository object provides methods for downloading annotation data
 from the Aroma repository.

classes

Core methods and classes used by higher-level 'aroma.*' packages
part of the Aroma Project, e.g. 'aroma.affymetrix' and 'aroma.cn'.

Henrik Bengtsson

aroma.core

Core Methods and Classes Used by 'aroma.*' Packages Part of the
Aroma Framework

Mark Robinson

Ken Simpson

AromaRepository function

<dl> <dt>urlPath</dt>
<dd>The URL to the Aroma repository.</dd> <dt>verbose</dt>
<dd>The <code>Verbose</code> to be used during processing.</dd> <dt>...</dt>
<dd>Not used.</dd></dl>

Arguments

Methods: <table class="table">
<tr><td></td><td><code>downloadACC</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadACM</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadACP</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadACS</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadAll</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadCDF</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadChipTypeFile</code></td><td>Download a particular chip type annotation file.</td></tr>
<tr><td></td><td><code>downloadProbeSeqsTXT</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadTXT</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadUFL</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadUGC</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadUGP</code></td><td>-</td></tr>
</table>Methods inherited from Object: 
$, $&lt;-, [[, [[&lt;-, as.character, attach, attachLocally, clearCache, clearLookupCache, clone, detach, equals, extend, finalize, getEnvironment, getFieldModifier, getFieldModifiers, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, names, objectSize, print, save, asThis

Methods

Author

Package: aroma.core 
Class AromaRepository 
<code>Object</code> 
<code>~~|</code> 
<code>~~+--</code><code>AromaRepository</code> 
Directly known subclasses: 
 
public static class AromaRepository 
extends Object 


An AromaRepository object provides methods for downloading annotation data
 from the Aroma repository.

The AromaRepository class — AromaRepository

<dl>

 <dt>urlPath</dt>
<dd>The URL to the Aroma repository.</dd>

 <dt>verbose</dt>
<dd>The <code>Verbose</code> to be used during processing.</dd>

 <dt>...</dt>
<dd>Not used.</dd>

</dl>

Methods: <table class='table'>
<tr><td></td><td><code>downloadACC</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadACM</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadACP</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadACS</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadAll</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadCDF</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadChipTypeFile</code></td><td>Download a particular chip type annotation file.</td></tr>
<tr><td></td><td><code>downloadProbeSeqsTXT</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadTXT</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadUFL</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadUGC</code></td><td>-</td></tr>
<tr><td></td><td><code>downloadUGP</code></td><td>-</td></tr>
</table>



Methods inherited from Object: 
$, $&lt;-, [[, [[&lt;-, as.character, attach, attachLocally, clearCache, clearLookupCache, clone, detach, equals, extend, finalize, getEnvironment, getFieldModifier, getFieldModifiers, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, names, objectSize, print, save, asThis

	`downloadACC`	-
	`downloadACM`	-
	`downloadACP`	-
	`downloadACS`	-
	`downloadAll`	-
	`downloadCDF`	-
	`downloadChipTypeFile`	Download a particular chip type annotation file.
	`downloadProbeSeqsTXT`	-
	`downloadTXT`	-
	`downloadUFL`	-
	`downloadUGC`	-
	`downloadUGP`	-

AromaRepository: The AromaRepository class

Description

Usage

Arguments

Methods

Author