Extracts relative copy numbers for a particular array and chromosome.
# S3 method for CopyNumberChromosomalModel
extractRawCopyNumbers(this, array, chromosome, ..., logBase=2, cache=FALSE, force=FALSE,
verbose=FALSE)
See subclasses.
The index of the array to be extracted.
The index of the chromosome to be extracted.
See subclasses.
(optional) The base of the logarithm used for the ratios.
If NULL
, the ratios are not logged.
If TRUE
, results are cached, otherwise not.
If TRUE
, cached results are ignored.
See Verbose
.
Except for an in-object caching (cache=TRUE
), this method
access data solely in an read-only fashion.
This method is safe to call with different arrays and/or
chromosomes in parallel.
Henrik Bengtsson
For more information see CopyNumberChromosomalModel
.