aroma.core (version 3.3.1)

segmentByHaarSeg.RawGenomicSignals: Segment copy numbers using the HaarSeg method

Description

Segment copy numbers using the HaarSeg method of the HaarSeg package.

Usage

# S3 method for RawGenomicSignals
segmentByHaarSeg(this, ..., cache=FALSE, force=FALSE, verbose=FALSE)

Value

Returns the fit object.

Arguments

...

Additional arguments passed to the segmentation function.

verbose

See Verbose.

Author

Henrik Bengtsson

Details

Internally haarSeg() of the HaarSeg is used to segment the signals. This segmentation method support weighted segmentation.

See Also

For more information see RawGenomicSignals.