plotXYCurve

plotXYCurve.numeric

plotXYCurve.matrix

Two <code><a rd-options="base" href="/link/numeric?package=aroma.light&version=3.2.0&to=base" data-mini-rdoc="base::numeric">numeric</a></code> <code><a rd-options="base" href="/link/vector?package=aroma.light&version=3.2.0&to=base" data-mini-rdoc="base::vector">vector</a></code>s of length N for one curve (K=1),
    or two <code><a rd-options="base" href="/link/numeric?package=aroma.light&version=3.2.0&to=base" data-mini-rdoc="base::numeric">numeric</a></code> NxK <code><a rd-options="base" href="/link/matrix?package=aroma.light&version=3.2.0&to=base" data-mini-rdoc="base::matrix">matrix</a></code>:es for K curves.

x, y, X, Y

The color of each curve.
    Either a scalar specifying the same value of all curves,
    or a <code><a rd-options="base" href="/link/vector?package=aroma.light&version=3.2.0&to=base" data-mini-rdoc="base::vector">vector</a></code> of K curve-specific values.

The line width of each curve.
    Either a scalar specifying the same value of all curves,
    or a <code><a rd-options="base" href="/link/vector?package=aroma.light&version=3.2.0&to=base" data-mini-rdoc="base::vector">vector</a></code> of K curve-specific values.

dlwd

The fill color of the interior of each density curve.

dcol

xlim, ylim

xlab, ylab

The <code><a rd-options="base" href="/link/function?package=aroma.light&version=3.2.0&to=base" data-mini-rdoc="base::function">function</a></code> used to fit each curve.  The two first
    arguments of the function must take <code>x</code> and <code>y</code>, and the
    function must return a <code><a rd-options="base" href="/link/list?package=aroma.light&version=3.2.0&to=base" data-mini-rdoc="base::list">list</a></code> with fitted elements <code>x</code> and
    <code>y</code>.

curveFit

Additional arguments passed to <code><a rd-options="graphics" href="/link/lines?package=aroma.light&version=3.2.0&to=graphics" data-mini-rdoc="graphics::lines">lines</a></code>
    used to draw each curve.

If <code><a rd-options="base:logical" href="/link/TRUE?package=aroma.light&version=3.2.0&to=base%3Alogical" data-mini-rdoc="base:logical::TRUE">TRUE</a></code>, the graph is added to the current plot, otherwise
    a new plot is created.


  Plot the relationship between two variables as a smooth curve.


multivariate

robust

methods

nonparametric

Methods for microarray analysis that take basic data types such as matrices and lists of vectors.  These methods can be used standalone, be utilized in other packages, or be wrapped up in higher-level classes.

Henrik Bengtsson

aroma.light

Light-Weight Methods for Normalization and Visualization of Microarray Data using Only Basic R Data Types

plotXYCurve function

Data points (x,y) with non-finite values are excluded.

Missing values

Two <code><a href="numeric" rd-options="base">numeric</a></code> <code><a href="vector" rd-options="base">vector</a></code>s of length N for one curve (K=1),
    or two <code><a href="numeric" rd-options="base">numeric</a></code> NxK <code><a href="matrix" rd-options="base">matrix</a></code>:es for K curves.

The color of each curve.
    Either a scalar specifying the same value of all curves,
    or a <code><a href="vector" rd-options="base">vector</a></code> of K curve-specific values.

The line width of each curve.
    Either a scalar specifying the same value of all curves,
    or a <code><a href="vector" rd-options="base">vector</a></code> of K curve-specific values.

The <code><a href="function" rd-options="base">function</a></code> used to fit each curve.  The two first
    arguments of the function must take <code>x</code> and <code>y</code>, and the
    function must return a <code><a href="list" rd-options="base">list</a></code> with fitted elements <code>x</code> and
    <code>y</code>.

Additional arguments passed to <code><a href="lines" rd-options="graphics">lines</a></code>
    used to draw each curve.

If <code><a href="TRUE" rd-options="base:logical">TRUE</a></code>, the graph is added to the current plot, otherwise
    a new plot is created.

Plot the relationship between two variables as a smooth curve.

plotXYCurve: Plot the relationship between two variables as a smooth curve

Description

Usage

Arguments

Value

Missing values