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asbio (version 0.3-30)
A collection of statistical tools for biologists
Description
Contains functions from: "Foundational Statistics for Biologists; A Textbook Using R" (Under contract; CRC Press; Release: Spring 2012)
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Install
install.packages('asbio')
Monthly Downloads
2,071
Version
0.3-30
License
GPL (>= 2)
Maintainer
Ken Aho
Last Published
March 31st, 2011
Functions in asbio (0.3-30)
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huber.NR
Huber M-estimator iterative least squares algorithm
partial.resid.plot
Partial residual plots for interpretation of multiple regression.
exercise.repeated
Repeated measures data for an exercise experiment.
beta.div
Beta diversity functions
Shep.comp
Shepard plot type comparisons for PCoA
bv.boxplot
Bivariate boxplots
rat
Rat glycogen data from Sokal and Rohlf (1995).
anm.samp.design
Animated demonstration of randomized sampling designs
trim.me
Trim data
G.mean
Geometric mean
HL.mean
Hodges-Lehman estimator of location
starkey
DEM data from the Starkey experimental forest in NE Oregon.
rankindex.new
Compares the efficacy of resemblance measures for a particular data scenario.
world.co2
World CO2 levels, by country, from 1980 to 2006
world.pop
Population levels in various countries since 1980
pseudo.v
Jacknife pseudo-values
anm.coin
Animated demonstration of frequentist binomial convergence of probability using a coin flip.
bootstrap
A simple function for bootstrapping
panel.cor.res
functions for customizing correlation matrices
samp.dist
Animated and/or snapshot representations of a statistic's sampling distribution
chi.plot
Chi plots for diagnosing multivariate independence.
km
Kaplan-Meier survivorship.
alfalfa.split.plot
An agricultural split plot design
asthma
Asthma repeated measures dataset from Littell et al. (2002)
one.sample.z
One sample z-test
modlevenes.test
Modified Levene's test
shade.norm.tck
GUI display of probability
get.dist
Calculates 26 possible resemblance measures.
MC.test
Monte Carlo hypothesis testing for two samples.
ci.mu.z
Z and t confidence intervals for mu.
e.cancer
Esophageal cancer data modified slightly to create a balanced three-way factorial design
cliff.env
Environmental data for the community dataset cliff.sp
alpha.div
Functions for calculating alpha diversity.
win
Winsorize data
H.mean
Harmonic mean
Preston.dist
Preston diversity analysis
anm.ExpDesign
Animated depiction of experimental designs
shade.norm
Shading functions for interpretation of pdf probabilities.
D.sq
Mahalanobis distance for two sites using a pooled covariance matrix
MS.test
Mack-Skillings test
Pairw.test
Conducts pairwise post hoc tests associated with an ANOVA.
power.z.test
Power analysis for a one sample z-test
Hotelling
Hotelling T-squared test
stan.error
Variance and standard error estimators for the sampling distribution of the sample mean
radiation.heatl
Radiation-heatload algorithm