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asbio (version 0.3-32)
A collection of statistical tools for biologists
Description
Contains functions from: "Foundational Statistics for Biologists; A Textbook Using R" (Under contract; CRC Press; Release: Spring 2012)
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Install
install.packages('asbio')
Monthly Downloads
3,877
Version
0.3-32
License
GPL (>= 2)
Maintainer
Ken Aho
Last Published
May 4th, 2011
Functions in asbio (0.3-32)
Search functions
beta.div
Beta diversity functions
anm.ExpDesign
Animated depiction of experimental designs
e.cancer
Esophageal cancer data modified slightly to create a balanced three-way factorial design
bootstrap
A simple function for bootstrapping
anm.samp.design
Animated demonstration of randomized sampling designs
G.mean
Geometric mean
huber.NR
Huber M-estimator iterative least squares algorithm
km
Kaplan-Meier survivorship.
samp.dist
Animated and/or snapshot representations of a statistic's sampling distribution
alfalfa.split.plot
An agricultural split plot design
Hotelling
Hotelling T-squared test
rat
Rat glycogen data from Sokal and Rohlf (1995).
shade.norm
Shading functions for interpretation of pdf probabilities.
get.dist
Calculates 26 possible resemblance measures.
H.mean
Harmonic mean
Shep.comp
Shepard plot type comparisons for PCoA
world.co2
World CO2 levels, by country, from 1980 to 2006
trim.me
Trim data
radiation.heatl
Radiation-heatload algorithm
modlevenes.test
Modified Levene's test
D.sq
Mahalanobis distance for two sites using a pooled covariance matrix
anm.coin
Animated demonstration of frequentist binomial convergence of probability using a coin flip.
win
Winsorize data
pseudo.v
Jacknife pseudo-values
MS.test
Mack-Skillings test
Preston.dist
Preston diversity analysis
chi.plot
Chi plots for diagnosing multivariate independence.
one.sample.z
One sample z-test
bv.boxplot
Bivariate boxplots
alpha.div
Functions for calculating alpha diversity.
partial.resid.plot
Partial residual plots for interpretation of multiple regression.
ci.mu.z
Z and t confidence intervals for mu.
asthma
Asthma repeated measures dataset from Littell et al. (2002)
HL.mean
Hodges-Lehman estimator of location
world.pop
Population levels in various countries since 1980
stan.error
Variance and standard error estimators for the sampling distribution of the sample mean
MC.test
Monte Carlo hypothesis testing for two samples.
cliff.env
Environmental data for the community dataset cliff.sp
exercise.repeated
Repeated measures data for an exercise experiment.
rankindex.new
Compares the efficacy of resemblance measures for a particular data scenario.
panel.cor.res
functions for customizing correlation matrices
power.z.test
Power analysis for a one sample z-test
Pairw.test
Conducts pairwise post hoc tests associated with an ANOVA.
starkey
DEM data from the Starkey experimental forest in NE Oregon.
shade.norm.tck
GUI display of probability