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asbio (version 0.3-34)
A collection of statistical tools for biologists
Description
Contains functions from: "Foundational Statistics for Biologists; A Textbook Using R" (Under contract; CRC Press; Release: Spring 2012)
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Install
install.packages('asbio')
Monthly Downloads
4,313
Version
0.3-34
License
GPL (>= 2)
Maintainer
Ken Aho
Last Published
May 16th, 2011
Functions in asbio (0.3-34)
Search functions
panel.cor.res
functions for customizing correlation matrices
starkey
DEM data from the Starkey experimental forest in NE Oregon.
samp.dist
Animated and/or snapshot representations of a statistic's sampling distribution
asthma
Asthma repeated measures dataset from Littell et al. (2002)
alfalfa.split.plot
An agricultural split plot design
MC.test
Monte Carlo hypothesis testing for two samples.
MS.test
Mack-Skillings test
get.dist
Calculates 26 possible resemblance measures.
one.sample.z
One sample z-test
radiation.heatl
Radiation-heatload algorithm
world.pop
Population levels in various countries since 1980
G.mean
Geometric mean
Pairw.test
Conducts pairwise post hoc tests associated with an ANOVA.
Shep.comp
Shepard plot type comparisons for PCoA
partial.resid.plot
Partial residual plots for interpretation of multiple regression.
modlevenes.test
Modified Levene's test
rankindex.new
Compares the efficacy of resemblance measures for a particular data scenario.
rat
Rat glycogen data from Sokal and Rohlf (1995).
alpha.div
Functions for calculating alpha diversity.
exercise.repeated
Repeated measures data for an exercise experiment.
bv.boxplot
Bivariate boxplots
e.cancer
Esophageal cancer data modified slightly to create a balanced three-way factorial design
trim.me
Trim data
cliff.env
Environmental data for the community dataset cliff.sp
Hotelling
Hotelling T-squared test
stan.error
Variance and standard error estimators for the sampling distribution of the sample mean
pseudo.v
Jacknife pseudo-values
Preston.dist
Preston diversity analysis
anm.ExpDesign
Animated depiction of experimental designs
km
Kaplan-Meier survivorship.
beta.div
Beta diversity functions
anm.samp.design
Animated demonstration of randomized sampling designs
win
Winsorize data
world.co2
World CO2 levels, by country, from 1980 to 2006
HL.mean
Hodges-Lehman estimator of location
shade.norm
Shading functions for interpretation of pdf probabilities.
D.sq
Mahalanobis distance for two sites using a pooled covariance matrix
ci.mu.z
Z and t confidence intervals for mu.
anm.coin
Animated demonstration of frequentist binomial convergence of probability using a coin flip.
bootstrap
A simple function for bootstrapping
power.z.test
Power analysis for a one sample z-test
H.mean
Harmonic mean
shade.norm.tck
GUI display of probability
chi.plot
Chi plots for diagnosing multivariate independence.
huber.NR
Huber M-estimator iterative least squares algorithm