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asbio (version 0.3-36)
A collection of statistical tools for biologists
Description
Contains functions from: "Foundational Statistics for Biologists; A Textbook Using R" (Under contract; CRC Press; Release: Spring 2012)
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Install
install.packages('asbio')
Monthly Downloads
3,877
Version
0.3-36
License
GPL (>= 2)
Maintainer
Ken Aho
Last Published
June 30th, 2011
Functions in asbio (0.3-36)
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e.cancer
Esophageal cancer data modified slightly to create a balanced three-way factorial design
cliff.env
Environmental data for the community dataset cliff.sp
pseudo.v
Jacknife pseudo-values
rat
Rat glycogen data from Sokal and Rohlf (1995).
bv.boxplot
Bivariate boxplots
stan.error
Variance and standard error estimators for the sampling distribution of the sample mean
trim.me
Trim data
asthma
Asthma repeated measures dataset from Littell et al. (2002)
panel.cor.res
functions for customizing correlation matrices
shade.norm.tck
GUI display of probability
Shep.comp
Shepard plot type comparisons for PCoA
chi.plot
Chi plots for diagnosing multivariate independence.
Preston.dist
Preston diversity analysis
power.z.test
Power analysis for a one sample z-test
partial.resid.plot
Partial residual plots for interpretation of multiple regression.
rankindex.new
Compares the efficacy of resemblance measures for a particular data scenario.
samp.dist
Animated and/or snapshot representations of a statistic's sampling distribution
win
Winsorize data
world.pop
Population levels in various countries since 1980
MC.test
Monte Carlo hypothesis testing for two samples.
D.sq
Mahalanobis distance for two sites using a pooled covariance matrix
beta.div
Beta diversity functions
alpha.div
Functions for calculating alpha diversity.
H.mean
Harmonic mean
exercise.repeated
Repeated measures data for an exercise experiment.
Pairw.test
Conducts pairwise post hoc tests associated with an ANOVA.
ci.mu.z
Z and t confidence intervals for mu.
one.sample.z
One sample z-test
modlevenes.test
Modified Levene's test
get.dist
Calculates 26 possible resemblance measures.
world.co2
World CO2 levels, by country, from 1980 to 2006
Hotelling
Hotelling T-squared test
MS.test
Mack-Skillings test
alfalfa.split.plot
An agricultural split plot design
anm.ExpDesign
Animated depiction of experimental designs
anm.samp.design
Animated demonstration of randomized sampling designs
shade.norm
Shading functions for interpretation of pdf probabilities.
G.mean
Geometric mean
radiation.heatl
Radiation-heatload algorithm
bootstrap
A simple function for bootstrapping
km
Kaplan-Meier survivorship.
anm.coin
Animated demonstration of frequentist binomial convergence of probability using a coin flip.
starkey
DEM data from the Starkey experimental forest in NE Oregon.
HL.mean
Hodges-Lehman estimator of location
huber.NR
Huber M-estimator iterative least squares algorithm