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asbio (version 0.3-42)
A collection of statistical tools for biologists
Description
Contains functions from: "Foundational Statistics for Biologists; A Textbook Using R" (Under contract; CRC Press; Release: Spring 2013)
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Install
install.packages('asbio')
Monthly Downloads
4,313
Version
0.3-42
License
GPL (>= 2)
Maintainer
Ken Aho
Last Published
July 8th, 2012
Functions in asbio (0.3-42)
Search functions
bootstrap
A simple function for bootstrapping
huber.NR
Huber M-estimator iterative least squares algorithm
alfalfa.split.plot
An agricultural split plot design
MS.test
Mack-Skillings test
anm.ExpDesign
Animated depiction of experimental designs
one.sample.z
One sample z-test
H.mean
Harmonic mean
modlevenes.test
Modified Levene's test
get.dist
Calculates 26 possible resemblance measures.
Pairw.test
Conducts pairwise post hoc tests associated with an ANOVA.
PM2.5
PM 2.5 pollutant data from Pocatello Idaho.
stan.error
Variance and standard error estimators for the sampling distribution of the sample mean
anm.coin
Animated demonstration of frequentist binomial convergence of probability using a coin flip.
panel.cor.res
functions for customizing correlation matrices
asthma
Asthma repeated measures dataset from Littell et al. (2002)
anm.samp.design
Animated demonstration of randomized sampling designs
radiation.heatl
Radiation-heatload algorithm
trim.me
Trim data
rankindex.new
Compares the efficacy of resemblance measures for a particular data scenario.
HL.mean
Hodges-Lehman estimator of location
partial.resid.plot
Partial residual plots for interpretation of multiple regression.
power.z.test
Power analysis for a one sample z-test
world.co2
World CO2 levels, by country, from 1980 to 2006
D.sq
Mahalanobis distance for two sites using a pooled covariance matrix
Preston.dist
Preston diversity analysis
chi.plot
Chi plots for diagnosing multivariate independence.
beta.div
Beta diversity functions
starkey
DEM data from the Starkey experimental forest in NE Oregon.
world.pop
Population levels in various countries since 1980
rat
Rat glycogen data from Sokal and Rohlf (1995).
pseudo.v
Jacknife pseudo-values
cuckoo
Tippett cuckoo egg data
ci.mu.z
Z and t confidence intervals for mu.
portneuf
Portneuf River longitudinal N and P data.
samp.dist
Animated and/or snapshot representations of a statistic's sampling distribution
Shep.comp
Shepard plot type comparisons for PCoA
km
Kaplan-Meier survivorship.
Hotelling
Hotelling T-squared test
MC.test
Monte Carlo hypothesis testing for two samples.
alpha.div
Functions for calculating alpha diversity.
e.cancer
Esophageal cancer data modified slightly to create a balanced three-way factorial design
shade.norm.tck
GUI display of probability
shade.norm
Shading functions for interpretation of pdf probabilities.
exercise.repeated
Repeated measures data for an exercise experiment.
cliff.env
Environmental data for the community dataset cliff.sp
bv.boxplot
Bivariate boxplots
G.mean
Geometric mean
win
Winsorize data