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asbio (version 1.1-1)

A collection of statistical tools for biologists

Description

Contains functions from: Aho, K. (2014) Foundational and Applied Statistics for Biologists using R. CRC/Taylor and Francis, Boca Raton, FL.

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Version

Install

install.packages('asbio')

Monthly Downloads

2,071

Version

1.1-1

License

GPL (>= 2)

Maintainer

Ken Aho

Last Published

September 6th, 2014

Functions in asbio (1.1-1)

anm.samp.design

Animated demonstration of randomized sampling designs
MS.test

Mack-Skillings test
asthma

Asthma repeated measures dataset from Littell et al. (2002)
PM2.5

PM 2.5 pollutant data from Pocatello Idaho.
moose.sel

Datasets for resource use and availability
D.sq

Mahalanobis distance for two sites using a pooled covariance matrix
cuckoo

Tippett cuckoo egg data
ci.mu.z

Z and t confidence intervals for mu.
huber.NR

Huber M-estimator iterative least squares algorithm
shade.norm

Shading functions for interpretation of pdf probabilities.
corn

Corn yield data
anm.coin

Animated demonstration of frequentist binomial convergence of probability using a coin flip.
e.cancer

Esophageal cancer data modified slightly to create a balanced three-way factorial design
starkey

DEM data from the Starkey experimental forest in NE Oregon.
panel.cor.res

Functions for customizing correlation matrices
bear

Grizzly bear litter sizes
rat

Rat glycogen data from Sokal and Rohlf (2012).
Preston.dist

Preston diversity analysis
G.mean

Geometric mean
portneuf

Portneuf River longitudinal N and P data.
world.pop

Population levels in various countries since 1980
HL.mean

Hodges-Lehman estimator of location
alfalfa.split.plot

An agricultural split plot design
see.ttest.tck

Visualize t-tests
shade.norm.tck

GUI display of probability
life.exp

Mouse life expectancy data.
km

Kaplan-Meier survivorship.
stan.error

Variance and standard error estimators for the sampling distribution of the sample mean
baby.walk

Baby walking times experimental data
MC.test

Monte Carlo hypothesis testing for two samples.
K

Soil potassium analyses from 8 laboratories
modlevene.test

Modified Levene's test
pseudo.v

Jacknife pseudo-values
alpha.div

Functions for calculating alpha diversity.
chi.plot

Chi plots for diagnosing multivariate independence.
ci.prat.ak

Confidence intervals for ratios of proportions when the denominator is known
caribou

Caribou count data
pairw.anova

Conducts pairwise post hoc and planned comparisons associated with an ANOVA
exercise.repeated

Repeated measures data for an exercise experiment.
qq.Plot

Normal quantile plots for multiple factor levels
snore

Snoring and heart disease contingency data
one.sample.z

One sample z-test
world.co2

World CO2 levels, by country, from 1980 to 2006
win

Winsorize data
H.mean

Harmonic mean
SM.temp.moist

Alpine soil temperature and moisture time series
trim.me

Trim data
bv.boxplot

Bivariate boxplots
sedum.ts

CO2 exchange time series data
potash

Potash/cotton strength data
cliff.env

Environmental data for the community dataset cliff.sp
power.z.test

Power analysis for a one sample z-test