asnipe v1.1.12
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Animal Social Network Inference and Permutations for Ecologists
Implements several tools that are used in animal social network analysis. In particular, this package provides the tools to infer groups and generate networks from observation data, perform permutation tests on the data, calculate lagged association rates, and performed multiple regression analysis on social network data.
Functions in asnipe
| Name | Description | |
| get_network | Calculating Weighted Network | |
| get_associations_points_tw | Calculate Group Membership using Time Window | |
| gmmevents | Infer gathering events | |
| LRA | Dyadic Lagged Association Rate | |
| asnipe-package | Animal Social Network inference and Permutation: asnipe | |
| mrqap.dsp | MRQAP with Double-Semi-Partialing (DSP) | |
| network_permutation | Perform Permutation | |
| get_group_by_individual | Convert group or individual data into a group by individual matrix | |
| times | Observation Time for each Flock Contained in the Group by Individual data | |
| mrqap.custom.null | MRQAP function with custom permutation networks | |
| inds | Data on the Individual Birds Contained in the Group by Individual data | |
| network_swap | Perform one (or more) random swap | |
| print.mrqap.dsp | Print function for mrqap.dsp | |
| LAR | Mean Lagged Association Rate | |
| gbi | Detections of Individuals Forming Flocks at Bird Feeders | |
| get_sampling_periods | Convert group or individual data into sampling periods | |
| identified_individuals | Raw Observation Data of Individual Birds Feeding at Flocks | |
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Details
| Type | Package |
| Date | 2019-08-19 |
| License | GPL-2 |
| Encoding | latin1 |
| Packaged | 2019-08-19 10:07:34 UTC; damienfarine |
| NeedsCompilation | no |
| Repository | CRAN |
| Date/Publication | 2019-08-19 12:40:02 UTC |
| suggests | ape , raster , sna |
| imports | MASS , Matrix |
| depends | R (>= 2.10) |
| Contributors | Damien Farine |
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