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asnipe (version 1.1.13)

Animal Social Network Inference and Permutations for Ecologists

Description

Implements several tools that are used in animal social network analysis, as described in Whitehead (2007) Analyzing Animal Societies and Farine & Whitehead (2015) . In particular, this package provides the tools to infer groups and generate networks from observation data, perform permutation tests on the data, calculate lagged association rates, and performed multiple regression analysis on social network data.

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Version

Install

install.packages('asnipe')

Monthly Downloads

701

Version

1.1.13

License

GPL-2

Maintainer

Damien Farine

Last Published

September 23rd, 2020

Functions in asnipe (1.1.13)

LRA

Dyadic Lagged Association Rate
get_associations_points_tw

Calculate Group Membership using Time Window
gbi

Detections of Individuals Forming Flocks at Bird Feeders
gmmevents

Infer gathering events
get_network

Calculating Weighted Network
asnipe-package

Animal Social Network inference and Permutation: asnipe
LAR

Mean Lagged Association Rate
identified_individuals

Raw Observation Data of Individual Birds Feeding at Flocks
get_group_by_individual

Convert group or individual data into a group by individual matrix
network_swap

Perform one (or more) random swap
inds

Data on the Individual Birds Contained in the Group by Individual data
get_sampling_periods

Convert group or individual data into sampling periods
mrqap.custom.null

MRQAP function with custom permutation networks
times

Observation Time for each Flock Contained in the Group by Individual data
mrqap.dsp

MRQAP with Double-Semi-Partialing (DSP)
network_permutation

Perform Permutation
print.mrqap.dsp

Print function for mrqap.dsp