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auk (version 0.2.2)

eBird Data Extraction and Processing with AWK

Description

Extract and process bird sightings records from eBird (), an online tool for recording bird observations. Public access to the full eBird database is via the eBird Basic Dataset (EBD; see for access), a downloadable text file. This package is an interface to AWK for extracting data from the EBD based on taxonomic, spatial, or temporal filters, to produce a manageable file size that can be imported into R.

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Install

install.packages('auk')

Monthly Downloads

1,026

Version

0.2.2

License

GPL-3

Issues

Pull Requests

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Maintainer

Matthew Strimas-Mackey

Last Published

July 23rd, 2018

Functions in auk (0.2.2)

auk_breeding

Filter to only include observations with breeding codes
ebird_species

Lookup species in eBird taxonomy
auk_zerofill

Read and zero-fill an eBird data file
auk_distance

Filter eBird data by distance travelled
auk_duration

Filter the eBird data by duration
auk_ebd

Reference to eBird data file
auk_country

Filter the eBird data by country
auk_date

Filter the eBird data by date
ebird_states

eBird States
auk_extent

Filter the eBird data by spatial extent
ebird_taxonomy

eBird Taxonomy
auk_sampling

Reference to eBird sampling event file
auk_project

Filter the eBird data by project code
auk_last_edited

Filter the eBird data by last edited date
auk_select

Select a subset of columns
reexports

Objects exported from other packages
read_ebd

Read an EBD file
auk_state

Filter the eBird data by state
auk_time

Filter the eBird data by checklist start time
auk_clean

Clean an eBird data file
auk_complete

Filter out incomplete checklists from the eBird data
auk_filter

Filter the eBird file using AWK
auk_getpath

OS specific path to AWK
auk_version_date

Dates of eBird Basic Dataset and taxonomy in package version
auk_unique

Remove duplicate group checklists
auk_protocol

Filter the eBird data by protocol
auk_rollup

Roll up eBird taxonomy to species
auk

auk: eBird Data Extraction and Processing with AWK
auk_species

Filter the eBird data by species
auk_split

Split an eBird data file by species