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bamlss (version 1.0-0)

Bayesian Additive Models for Location Scale and Shape (and Beyond)

Description

Infrastructure for estimating probabilistic distributional regression models in a Bayesian framework. The distribution parameters may capture location, scale, shape, etc. and every parameter may depend on complex additive terms (fixed, random, smooth, spatial, etc.) similar to a generalized additive model. The conceptual and computational framework is introduced in Umlauf, Klein, Zeileis (2017) .

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Version

Install

install.packages('bamlss')

Monthly Downloads

1,195

Version

1.0-0

License

GPL-2 | GPL-3

Maintainer

Nikolaus Umlauf

Last Published

April 13th, 2018

Functions in bamlss (1.0-0)

Surv2

Create a Survival Object for Joint Models
Volcano

Artificial Data Set based on Auckland's Maunga Whau Volcano
bamlss.formula

Formulae for BAMLSS
bamlss.frame

Create a Model Frame for BAMLSS
cox.predict

Cox Model Prediction
dl.bamlss

Deep Learning BAMLSS
bamlss-package

Bayesian Additive Models for Location Scale and Shape (and Beyond)
bamlss

Fit Bayesian Additive Models for Location Scale and Shape (and Beyond)
bamlss.engine.helpers

BAMLSS Engine Helper Functions
gF

Get a BAMLSS Family
n

Neural Networks for BAMLSS
bamlss.engine.setup

BAMLSS Engine Setup Function
neighbormatrix

Compute a Neighborhood Matrix from Spatial Polygons
c95

Compute 95% Credible Interval and Mean
coef.bamlss

Extract BAMLSS Coefficients
bfit

Fit BAMLSS with Backfitting
homstart_data

HOMSTART Precipitation Data
boost

Boosting BAMLSS
cox.mcmc

Cox Model Markov Chain Monte Carlo
colorlegend

Plot a Color Legend
continue

Continue Sampling
family.bamlss

Distribution Families in bamlss
fitted.bamlss

BAMLSS Fitted Values
cox.mode

Cox Model Posterior Mode Estimation
rmf

Remove Special Characters
plot3d

Plot 3D Effects
plot2d

Plot 2D Effects
s2

Special Smooths in BAMLSS Formulae
model.frame.bamlss

BAMLSS Model Frame
model.matrix.bamlss.frame

Construct/Extract BAMLSS Design Matrices
scale2

Scaling Vectors and Matrices
simJM

Simulate longitudinal and survival data for joint models
samples

Extract Samples
parameters

Extract or Initialize Parameters for BAMLSS
plotblock

Factor Variable and Random Effects Plots
samplestats

Sampling Statistics
plotmap

Plot Maps
plot.bamlss

Plotting BAMLSS
predict.bamlss

BAMLSS Prediction
randomize

Transform Smooth Constructs to Random Effects
terms.bamlss

BAMLSS Model Terms
la

Lasso Smooth Constructor
jm_bamlss

Fit Flexible Additive Joint Models
simSurv

Simulate Survival Times
sliceplot

Plot Slices of Bivariate Functions
summary.bamlss

Summary for BAMLSS
surv.transform

Survival Model Transformer Function
residuals.bamlss

Compute BAMLSS Residuals
results.bamlss.default

Compute BAMLSS Results for Plotting and Summaries
smooth.construct

Constructor Functions for Smooth Terms in BAMLSS
stabsel

Stability selection.
LondonFire

London Fire Data
MVNORM

Create Samples for BAMLSS by Multivariate Normal Approximation
GMCMC

General Markov Chain Monte Carlo for BAMLSS
JAGS

Markov Chain Monte Carlo for BAMLSS using JAGS
Austria

Austria States and Topography
BayesX

Markov Chain Monte Carlo for BAMLSS using BayesX
DIC

Deviance Information Criterion
GAMart

GAM Artificial Data Set