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baseline

R package baseline

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Version

Install

install.packages('baseline')

Monthly Downloads

1,091

Version

1.3-1

License

GPL-2

Maintainer

Kristian Hovde Liland

Last Published

September 12th, 2020

Functions in baseline (1.3-1)

baseline-class

Class "baseline"
XPSdata

XPS core line data
baseline.als

Asymmetric Least Squares
baseline.TAP

TAP
baseline.fillPeaks

Fill peaks
baseline

Baseline correction
baseline-package

Baseline correction
baseline.shirley

Shirley Background Estimation
PLSRTest-class

Class "PLSRTest"
baseline.irls

Iterative Restricted Least Squares
algorithm

Extraction methods for "baselineAlgTest" objects
baselineAlgorithmsGUI

List of available baseline algorithms for GUI function
baselineAlgTest-class

Class "baselineAlgTest"
baselineAlgResult-class

Class "baselineAlgResult"
baseline.peakDetection

Simultaneous Peak Detection and Baseline Correction
baseline.modpolyfit

Modified polynomial fitting
baselineAlgorithms

List of available baseline algorithms
baselineAlg-class

Class "baselineAlg"
baseline.lowpass

Low-pass FFT filter
baseline.rfbaseline

Robust Baseline Estimation
funcName

Extract the "funcName" slot.
overall.min

Extract the minimum from a baseline optimisation
doOptim

Optimise several baseline algorithms on a data set
baseline.rollingBall

Rolling ball
baseline.medianWindow

Median window
baselineEnv

Baseline environment
custom.baseline

Customized baseline correction
param

Extract the "param" slot
plotOptim

Plotting tool for result objects from optimization
baselineGUI

Interactive plotting tool
predictionResult-class

Class "predictionResult"
ridgeRegressionTest-class

Class "ridgeRegressionTest"
runTest

Run a predictionTest or baselineAlgTest
predictionTest-class

Class "predictionTest"
ind.min

Extraction methods specific for "predictionResult" objects
param.ind.min

Extraction methods for "baselineAlgResult" objects
plotBaseline

Plot method for "baseline" objects
milk

MALDI-TOF mass spectra
optimWizard

Visual tool for setting up optimization
getBaseline

Functions to extract the components of a "baseline" object
qualMeas

Extraction functions for "predictionResult" or "baselineAlgResult" objects
name

Extraction methods for "baselineAlg" objects