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batchtma (version 0.1.6)

Batch Effect Adjustments

Description

Different adjustment methods for batch effects in biomarker data, such as from tissue microarrays. Some methods attempt to retain differences between batches that may be due to between-batch differences in "biological" factors that influence biomarker values.

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Install

install.packages('batchtma')

Monthly Downloads

235

Version

0.1.6

License

GPL-3

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Maintainer

Konrad Stopsack

Last Published

December 6th, 2021

Functions in batchtma (0.1.6)

plot_batch

Plot biomarkers by batch
batchtma

batchtma: Methods to address batch effects
diagnose_models

Model diagnostics after batch adjustment
adjust_batch

Adjust for batch effects