bayesplot v1.7.0

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Plotting for Bayesian Models

Plotting functions for posterior analysis, prior and posterior predictive checks, and MCMC diagnostics. The package is designed not only to provide convenient functionality for users, but also a common set of functions that can be easily used by developers working on a variety of R packages for Bayesian modeling, particularly (but not exclusively) packages interfacing with 'Stan'.

Functions in bayesplot

Name Description
PPC-errors PPC errors
PPC-discrete PPCs for discrete outcomes
tidy-params Tidy parameter selection
available_ppc Get or view the names of available plotting functions
theme_default Default bayesplot plotting theme
bayesplot-colors Set, get, or view bayesplot color schemes
bayesplot_theme_get Get, set, and modify the active bayesplot theme
PPC-intervals PPC intervals
example-data Example draws to use in demonstrations and tests
PPC-distributions PPC distributions
MCMC-overview Plots for Markov chain Monte Carlo simulations
bayesplot-package bayesplot: Plotting for Bayesian Models
PPC-scatterplots PPC scatterplots
PPC-loo LOO predictive checks
bayesplot-helpers Convenience functions for adding or changing plot details
PPC-overview Graphical posterior predictive checking
bayesplot-extractors Extract quantities needed for plotting from model objects
bayesplot_grid Arrange plots in a grid
PPC-test-statistics PPC test statistics
pp_check Posterior (or prior) predictive checks (S3 generic and default method)
reexports Objects exported from other packages
MCMC-distributions Histograms and kernel density plots of MCMC draws
MCMC-intervals Plot interval estimates from MCMC draws
MCMC-nuts Diagnostic plots for the No-U-Turn-Sampler (NUTS)
MCMC-traces Trace plots of MCMC draws
MCMC-scatterplots Scatterplots of MCMC draws
MCMC-parcoord Parallel coordinates plot of MCMC draws
MCMC-combos Combination plots
MCMC-recover Compare MCMC estimates to "true" parameter values
MCMC-diagnostics General MCMC diagnostics
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Vignettes of bayesplot

Name
children/SETTINGS-knitr.txt
graphical-ppcs.Rmd
plotting-mcmc-draws.Rmd
visual-mcmc-diagnostics.Rmd
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Details

Type Package
Date 2019-05-22
License GPL (>= 3)
LazyData TRUE
URL https://mc-stan.org/bayesplot
BugReports https://github.com/stan-dev/bayesplot/issues/
SystemRequirements pandoc (>= 1.12.3), pandoc-citeproc
RoxygenNote 6.1.1
VignetteBuilder knitr
Encoding UTF-8
NeedsCompilation no
Packaged 2019-05-22 18:59:18 UTC; jgabry
Repository CRAN
Date/Publication 2019-05-23 04:50:03 UTC

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