set.burnin

Set the burnin proportion for bayouMCMC objects

Fits and simulates multi-optima Ornstein-Uhlenbeck models to phylogenetic comparative data using
Bayesian reversible-jump methods. See Uyeda and Harmon (2014) <DOI:10.1093/sysbio/syu057>.

Josef Uyeda

bayou

Bayesian Fitting of Ornstein-Uhlenbeck Models to Phylogenies

Josef C. Uyeda

Jon Eastman

Luke Harmon

Abhishek Hari

set.burnin function

<dl><dt>chain</dt>
<dd>A bayouMCMC chain or an ssMCMC chain</dd>
<dt>burnin</dt>
<dd>The burnin proportion of samples to be discarded from downstream analyses.</dd></dl>

Arguments

Set the burnin proportion for bayouMCMC objects — set.burnin

<dl>

<dt>chain</dt>
<dd>A bayouMCMC chain or an ssMCMC chain</dd>


<dt>burnin</dt>
<dd>The burnin proportion of samples to be discarded from downstream analyses.</dd>

</dl>

set.burnin: Set the burnin proportion for bayouMCMC objects

Description

Usage

Value

Arguments