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bcRep (version 1.2.2)

combineIMGT: Combination of several IMGT output folders

Description

This function combines several IMGT ouput folders. IMGT/HighV-QUEST can analyse data with up to 500.000 sequences. In case you want to analyse more than 500.000 sequences, you have to split the FASTA file into smaller files and analyse them individually. Afterwards IMGT output folders can be combined using this function.

Usage

combineIMGT(folders = NULL, name = NULL)

Arguments

folders
A list containing folder names (see Example
name
Name of the new (combined) project

Value

  • Output is a folder containing the 10 combined output files.

Examples

Run this code
## Combine folders IMGT1a, IMGT1b, IMGT1c to one folder named "NewProject"
combineIMGT(folders = c("pathTo/IMGT1a", "pathTo/IMGT1b", "pathTo/IMGT1c"), 
name = "NewProject)

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