bclustvs: bclustvs (Bayesian CLUSTering with Variable Selection) is a class
Description
The bclustvs object can be regarded as a Bayesian extension of the hclust object that additionally contains information of a Bayesian dendrogram.
You can convert any bclustvs object to a dendrogram object using as.dendrogram.Value
- dataThe data matrix, reordered according to
rep.id. - repnoThe number of replicates of the values of
rep.id - mergeThe merge matrix in
hclust object format. - heightA monotone vector referring to the height of the
constructed tree.
- logposteriorThe log posterior for each merge.
- clust.numberThe number of clusters in each merge.
- cutThe value of the height corresponding to the maximum of the log posterior in agglomerative path.
- transformed.parThe transformed values of the model parameters.
The log transformation is applied for the variance parameters, the identity for the mean, and the logit for the proportions.
- labelsThe labels associated to each clustering type.
- effect.familyThe distribution assigned to the disappearing random effect.
- var.selectAvailability of variable selection chosen in the function arguments.