beastier (version 2.5)

create_beast2_continue_cmd_from_options: Creates the terminal command to run BEAST2 from a beast2_options

Description

If the BEAST2 input .xml filename or the BEAST2 state .state.xml filename contain spaces, these filenames are quoted, so that the command-line interface to BEAST2 correctly parses its arguments

Usage

create_beast2_continue_cmd_from_options(beast2_options)

Value

a character vector with the command and arguments to call BEAST2

Arguments

beast2_options

a set of BEAST2 options, that are the R equivalent of the BEAST2 command-line options, as can be created by create_beast2_options

Author

Richèl J.C. Bilderbeek

Examples

  if (is_beast2_installed()) {
    create_beast2_continue_cmd_from_options(
      beast2_options = create_beast2_options()
    )
  }